miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

ABOUT THIS RECORD

ID: MNEST045361
species: Manihot esculenta
miRNA family: MIR171
source: microPC, original name: miR171

Taxonomy by NCBI:
Manihot esculenta Manihot Manihoteae Crotonoideae Euphorbiaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
TGATTGAGCCGCGTCAATATC

miRNA*
TATTGGCGTGCCTCAATCTAA

mismatches: 4
bulges: 0

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pre-miRNA
TATTGGCGTGCCTCAATCTAATTACATGGTTAAATGATATGTTTTAGCCAAGTACTTTTGATTGAGCCGCGTCAATATC

dot-bracket secondary structure
((((((((((.(((((((.((.(((.((((((((........)))))))).))).))..))))))).))))))))))..

UniProt no hits

RFAM MIR171_1: 0.00006

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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