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ABOUT THIS RECORD

ID: MNEST045367
species: Nicotiana tabacum
source: microPC, original name: miR159

Taxonomy by NCBI:
Nicotiana tabacum Nicotiana Nicotianeae Nicotianoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CTTGGACTGAAGGGAGCTCCT

miRNA*
 AGAGCTTCCTTCACCCACTCA

mismatches: 3
bulges: 2
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pre-miRNA
 AGAGAGCTTCCTTCACCCACTCATGGAGGAGAACTGGGGTTGAATTAGCTGCCGCCTCATTCATCCAACCACTCAGTAGAAAGGAATAGGTTTTGTGCTA
CTGTGATTGAGTGAATGATGCGGGAGATAGTTTTCTATTCCTCTCTTTCCTTGCTTGGACTGAAGGGAGCTCCT

dot-bracket secondary structure
((.((((((((((((.(((..((.((((((((...(((((.((((((.((.((((.(((((((..(((.(((..(((((...((((....))))...)))
))))).)))..))))))).)))).)).))))))...))))))))).)))).))..)))..))))))))))))))


SIMILARITIES
miRBase ptc-MIR319f: 4e-20

PMRD ptc-miR319f: 4e-20

microPC miR319: 7e-96		UniProt no hits

RFAM MIR159: 8e-19

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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