ABOUT THIS RECORDspecies: Phaseolus coccineus
source: microPC, original name: miR167
Taxonomy by NCBI:
Phaseolus coccineus Phaseolus Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AAGCTGCCAGCATGATCTT miRNA* GATCATGTGGCAGTTT mismatches: 1 bulges: 1 |
pre-miRNA
AAGCTGCCAGCATGATCTTAACTTCCCTCACTTGGTTGAGGAGAGATCAGATCATGTGGCAGTTT
dot-bracket secondary structure
(((((((((.((((((((...((..(((((......)))))..))...)))))))))))))))))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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AAGCTGCCAGCATGATCTTAACTTCCCTCACTTGGTTGAGGAGAGATCAGATCATGTGGCAGTTT
dot-bracket secondary structure
(((((((((.((((((((...((..(((((......)))))..))...)))))))))))))))))
SIMILARITIES| miRBase gma-MIR167f: 2e-19 PMRD pco-miR167: 2e-31 microPC miR167: 2e-31 | UniProt no hits RFAM MIR167_1: 0.0000000000002 |
Identical with: pco-miR167 from PMRD (MNEST051324) |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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