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ABOUT THIS RECORD

ID: MNEST045391
species: Nicotiana tabacum
source: microPC, original name: miR159

Taxonomy by NCBI:
Nicotiana tabacum Nicotiana Nicotianeae Nicotianoideae Solanaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTGGATCGAAGGGAGCTCTA

miRNA*
GAGCTCCTTGAAGTCCAACA

mismatches: 4
bulges: 0

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pre-miRNA
GGAGCTCCTTGAAGTCCAACAGAGGATCTAACAGGTAAGATTAAGCTGCTGACCTATGGATTCCTCAGTCCTATCTATTATTTGATAGGATAGGTAAGTG
GGTAGCATATGTCAGGAGCTACATTACCCTAAGTTGGATCGCTTATTGGATCGAAGGGAGCTCTA


dot-bracket secondary structure
((((((((((...((((((..(((((((((((.(((((.....((((.(((((.((((...(((((.((((((((........)))))))).)).....)
))...)))).))))).))))...)))))....)))))))).))).))))))...)))))))))).



SIMILARITIES
miRBase sly-MIR159: 2e-22

PMRD sly-miR159: 2e-22

microPC miR159: 6e-90
UniProt no hits

RFAM MIR159: 2e-28

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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