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ABOUT THIS RECORD
ID:
MNEST045391
species:
Nicotiana tabacum
source:
microPC, original name:
miR159
Taxonomy by NCBI:
Nicotiana tabacum
Nicotiana
Nicotianeae
Nicotianoideae
Solanaceae
Solanales
lamiids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTGGATCGAAGGGAGCTCTA
miRNA*
GAGCTCCTTGAAGTCCAACA
mismatches:
4
bulges:
0
View larger
pre-miRNA
G
GAGCTCCTTGAAGTCCAACA
GAGGATCTAACAGGTAAGATTAAGCTGCTGACCTATGGATTCCTCAGTCCTATCTATTATTTGATAGGATAGGTAAGTG
GGTAGCATATGTCAGGAGCTACATTACCCTAAGTTGGATCGCTTA
TTGGATCGAAGGGAGCTCTA
dot-bracket secondary structure
(
(((((((((...((((((..
(((((((((((.(((((.....((((.(((((.((((...(((((.((((((((........)))))))).)).....)
))...)))).))))).))))...)))))....)))))))).))).
))))))...)))))))))).
SIMILARITIES
miRBase
sly-MIR159
:
2e-22
PMRD
sly-miR159
:
2e-22
microPC
miR159
:
6e-90
UniProt
no hits
RFAM
MIR159: 2e-28
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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