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ABOUT THIS RECORD
ID:
MNEST045401
species:
Bruguiera gymnorhiza
miRNA family:
MIR396
source:
microPC, original name:
miR396
Taxonomy by NCBI:
Bruguiera gymnorhiza
Bruguiera
Rhizophoraceae
Malpighiales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTCCACAGCTTTCTTGAACTT
miRNA*
GCTCAAGAAAGCTGTGGGA
mismatches:
1
bulges:
0
View larger
pre-miRNA
TTCCACAGCTTTCTTGAACTT
TCTTGAACTGCTTTTTATAATTTTTGTATATAGCACCATACATGGAA
GCTCAAGAAAGCTGTGGGA
dot-bracket secondary structure
(((((((((((((((((.(((
((.((...((((...((((.....))))...)))).....)).))))
).)))))))))))))))))
SIMILARITIES
miRBase
ptc-MIR396e
:
0.00000007
PMRD
ptc-miRf11357-akr
:
0.00000007
microPC
miR396
:
3e-44
UniProt
no hits
RFAM
MIR396: 0.000001
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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