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ABOUT THIS RECORD

ID: MNEST045401
species: Bruguiera gymnorhiza
miRNA family: MIR396
source: microPC, original name: miR396

Taxonomy by NCBI:
Bruguiera gymnorhiza Bruguiera Rhizophoraceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TTCCACAGCTTTCTTGAACTT

miRNA*
GCTCAAGAAAGCTGTGGGA

mismatches: 1
bulges: 0

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pre-miRNA
TTCCACAGCTTTCTTGAACTTTCTTGAACTGCTTTTTATAATTTTTGTATATAGCACCATACATGGAAGCTCAAGAAAGCTGTGGGA

dot-bracket secondary structure
(((((((((((((((((.(((((.((...((((...((((.....))))...)))).....)).))))).)))))))))))))))))


SIMILARITIES
miRBase ptc-MIR396e: 0.00000007

PMRD ptc-miRf11357-akr: 0.00000007

microPC miR396: 3e-44
UniProt no hits

RFAM MIR396: 0.000001

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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