ABOUT THIS RECORDspecies: Citrus sinensis
miRNA family: MIR403
source: microPC, original name: miR403
Taxonomy by NCBI:
Citrus sinensis Citrus Rutaceae Sapindales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTAGATTCACGCACAAACTCG miRNA* GGTTTGTGCGTGAATTTAATA mismatches: 0 bulges: 0 |
pre-miRNA
CGGGTTTGTGCGTGAATTTAATAAAATAACCGCTTCTTTTAATCTCGTTCCCCCATTTTTTGTTAGTAACAAATTTTTGCCGTCAGTGTTAGATTCACGC
ACAAACTCG
dot-bracket secondary structure
(((((((((((((((((((((((...(.((.((.............(......)....(((((.....))))).....)).)).).))))))))))))))
)))))))))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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CGGGTTTGTGCGTGAATTTAATAAAATAACCGCTTCTTTTAATCTCGTTCCCCCATTTTTTGTTAGTAACAAATTTTTGCCGTCAGTGTTAGATTCACGC
ACAAACTCG
dot-bracket secondary structure
(((((((((((((((((((((((...(.((.((.............(......)....(((((.....))))).....)).)).).))))))))))))))
)))))))))
SIMILARITIES| miRBase csi-MIR403: 3e-57 PMRD vvi-miR403d: 0.000001 microPC miR403: 0.00002 | UniProt no hits RFAM MIR403: 0.00002 |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record
