ABOUT THIS RECORDspecies: Aquilegia formosa x Aquilegia pubescens
source: microPC, original name: miR395
Taxonomy by NCBI:
Aquilegia formosa x Aquilegia pubescens Aquilegia Ranunculaceae Ranunculales stem eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CTGAAGGGTTTGGAGGAACTC miRNA* GTTTCTCCTGCCGCTTCAGGA mismatches: 1 bulges: 2 |
pre-miRNA
GAGTTTCTCCTGCCGCTTCAGGAACGATCAATTGCAAAATTTGTTATTACTGAAGGGTTTGGAGGAACTC
dot-bracket secondary structure
((((((((((.(((.((((((.((..((.((((....)))).))..)).)))))))))..))))))))))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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GAGTTTCTCCTGCCGCTTCAGGAACGATCAATTGCAAAATTTGTTATTACTGAAGGGTTTGGAGGAACTC
dot-bracket secondary structure
((((((((((.(((.((((((.((..((.((((....)))).))..)).)))))))))..))))))))))
SIMILARITIES| miRBase aqc-MIR395b: 3e-34 PMRD aqc-miR395b: 3e-34 microPC miR395: 3e-34 | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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