ABOUT THIS RECORDspecies: Prunus persica
source: microPC, original name: miR156
Taxonomy by NCBI:
Prunus persica Prunus Amygdaleae Spiraeoideae Rosaceae Rosales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CAGAAGAAAGAGAGCACAAC miRNA* GTGTGCTCTCTCTTCTTCTG mismatches: 1 bulges: 1 |
pre-miRNA
CAGAAGAAAGAGAGCACAACCCGCCATTGGCCAAAGAGATCTTCGCCACTGTTGGGAGTGTGCTCTCTCTTCTTCTG
dot-bracket secondary structure
((((((((((((((((((.((((.((.((((..(((....))).)))).)).))))..)))))))))).))))))))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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CAGAAGAAAGAGAGCACAACCCGCCATTGGCCAAAGAGATCTTCGCCACTGTTGGGAGTGTGCTCTCTCTTCTTCTG
dot-bracket secondary structure
((((((((((((((((((.((((.((.((((..(((....))).)))).)).))))..)))))))))).))))))))
SIMILARITIES| miRBase rco-MIR156e: 0.000000000001 PMRD vvi-miR156a: 0.00000006 microPC miR157: 2e-38 | UniProt no hits RFAM mir-156: 0.00000000002 |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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