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ABOUT THIS RECORD
ID:
MNEST045454
species:
Brassica napus
source:
microPC, original name:
miR167
Taxonomy by NCBI:
Brassica napus
Brassica
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AAGCTGCCAGCATGATCT
miRNA*
ATCATGTTCGTAGTTT
mismatches:
1
bulges:
0
View larger
pre-miRNA
AAGCTGCCAGCATGATCT
AGTTAACTTTATTTCTCCGTTGTTTATCCATGACAATGGAAAAGGGATAAGTGTCGATTAG
ATCATGTTCGTAGTTT
dot-bracket secondary structure
(((((((.((((((((((
(((..(((((((..((((((((((.......)))))))))...)..))))).))..)))))
)))))))).)))))))
SIMILARITIES
miRBase
bra-MIR167a
:
5e-49
PMRD
bra-miR167a
:
5e-49
microPC
miR167
:
5e-49
UniProt
no hits
RFAM
MIR167_1: 9e-48
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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