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ABOUT THIS RECORD

ID: MNEST045475
species: Lactuca serriola
source: microPC, original name: miR169

Taxonomy by NCBI:
Lactuca serriola Lactuca Lactucinae Cichorieae Cichorioideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 AGCCAAGGATGACTTGCC

miRNA*
 CAGTCTTCTTGGCT

mismatches: 0
bulges: 2
View larger
pre-miRNA
 AGCCAAGGATGACTTGCCTGTTGCTTTCTCTCAAAGGATTTATTTATATCAAGACCTTTGTTAGACTGGTTATCAGGCAGTCTTCTTGGCT

dot-bracket secondary structure
(((((((((.((((.(((((..(((.(((..((((((.(((..........)))))))))..)))..)))...))))))))))))))))))


SIMILARITIES
miRBase ath-MIR169m: 0.000004

PMRD ath-miR169m: 0.000004

microPC miR169: 1e-46		UniProt no hits

RFAM MIR169_5: 0.00008

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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