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ABOUT THIS RECORD

ID: MNEST045509
species: Cichorium intybus
miRNA family: MIR166
source: microPC, original name: miR166

Taxonomy by NCBI:
Cichorium intybus Cichorium Cichoriinae Cichorieae Cichorioideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCGGACCAGGCTTCATTCCCC

miRNA*
 AGGGATGTTGTCTGGCTCCAGGCC

mismatches: 2
bulges: 3
View larger
pre-miRNA
 GGAGGGATGTTGTCTGGCTCCAGGCCACTAGAGAACCTTATGGATCTCTCGATCTATGGATCTCTTTTCTCTCTATATATATTACATAATATATATGTAT
ATCATCATAGTCAACGCATCTGATTTCATTGCCTTCGTTGACTAGAGATGGTGATAGATCATTCTTGATCTGGTGTCGTCGGACCAGGCTTCATTCCCC

dot-bracket secondary structure
((.((((((..((((((.(((.(((.((.(((((.((..(((((((....))))))))).)))))........((((((((((....))))))))))..(
((((((.(((((((((((..((....)).)))....))))))))..))))))).(((((((....)))))))..)).))))))))))))..))))))))


SIMILARITIES
miRBase vvi-MIR166e: 0.000000003

PMRD vvi-miR166e: 0.000000003

microPC miR166: 3e-49		UniProt no hits

RFAM mir-166: 0.00000005

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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