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ABOUT THIS RECORD

ID: MNEST045514
species: Oryza sativa
source: microPC, original name: miR1132

Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CATTATGAAACGGAGGGAG

miRNA*
TTCTCCGTTTCACAATGTA

mismatches: 4
bulges: 0

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pre-miRNA
TTTCTCCGTTTCACAATGTAATACTTTCTAGCATTGCACATATTCATATAGATATTAATGAATCTAGGCATATATATGTGTTTAGATTCATTAACTTCTA
TATAAATATGGGTAGTGCTAGAAAATCCTACATTATGAAACGGAGGGAG


dot-bracket secondary structure
(..((((((((((.((((((....(((((((((((((.((((((.(((((((..((((((((((((((((((....))))))))))))))))))..))))
))).)))))).)))))))))))))....)))))).))))))))))..).



SIMILARITIES
miRBase osa-MIR819i: 6e-28

PMRD osa-miR819i: 6e-28

microPC miR1132: 5e-81
UniProt no hits

RFAM MIR1122: 8e-40

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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