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ABOUT THIS RECORD
ID:
MNEST045514
species:
Oryza sativa
source:
microPC, original name:
miR1132
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CATTATGAAACGGAGGGAG
miRNA*
TTCTCCGTTTCACAATGTA
mismatches:
4
bulges:
0
View larger
pre-miRNA
T
TTCTCCGTTTCACAATGTA
ATACTTTCTAGCATTGCACATATTCATATAGATATTAATGAATCTAGGCATATATATGTGTTTAGATTCATTAACTTCTA
TATAAATATGGGTAGTGCTAGAAAATCCTA
CATTATGAAACGGAGGGAG
dot-bracket secondary structure
(
..((((((((((.((((((
....(((((((((((((.((((((.(((((((..((((((((((((((((((....))))))))))))))))))..))))
))).)))))).)))))))))))))....))
)))).))))))))))..).
SIMILARITIES
miRBase
osa-MIR819i
:
6e-28
PMRD
osa-miR819i
:
6e-28
microPC
miR1132
:
5e-81
UniProt
no hits
RFAM
MIR1122: 8e-40
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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