ABOUT THIS RECORDspecies: Euphorbia esula
source: microPC, original name: miR169
Taxonomy by NCBI:
Euphorbia esula Euphorbia Euphorbieae Euphorbioideae Euphorbiaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA AGCCAAGGATGACTTGCC miRNA* CAAGTCTCCTTGGTT mismatches: 0 bulges: 1 |
pre-miRNA
AGCCAAGGATGACTTGCCGCGCATTATGTATATATTTATTTTTATATATATGTCATCATTAAGAATTTATATATTGTATTGTTGGTGTGGCAAGTCTCCT
TGGTT
dot-bracket secondary structure
(((((((((.((((((((((((..((((((((((........))))))))))...((.....))....................))))))))))))))))
)))))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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AGCCAAGGATGACTTGCCGCGCATTATGTATATATTTATTTTTATATATATGTCATCATTAAGAATTTATATATTGTATTGTTGGTGTGGCAAGTCTCCT
TGGTT
dot-bracket secondary structure
(((((((((.((((((((((((..((((((((((........))))))))))...((.....))....................))))))))))))))))
)))))
SIMILARITIES| miRBase rco-MIR169c: 0.00002 PMRD vvi-miR169o: 0.0003 microPC miR169: 0.0000003 | UniProt no hits RFAM MIR169_2: 0.0004 |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record
