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ABOUT THIS RECORD

ID: MNEST045562
species: Saccharum officinarum
miRNA family: MIR444
source: microPC, original name: miR444

Taxonomy by NCBI:
Saccharum officinarum Saccharum officinarum complex Saccharum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGCAGTTGCTGTCTCAAGCTT

miRNA*
 GCTAGAGGCAGCAACTGCATA

mismatches: 1
bulges: 0
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pre-miRNA
 AAGCTAGAGGCAGCAACTGCATATCTTGCAAGAAAATTGGTTTTCGAACCATACCGATAATTTTCTTGCAAGTTGTGCAGTTGCTGTCTCAAGCTT

dot-bracket secondary structure
(((((.(((((((((((((((((.(((((((((((((((....(((........)))))))))))))))))).))))))))))))))))).)))))


SIMILARITIES
miRBase ssp-MIR444c: 3e-47

PMRD pvi-miR444: 1e-37

microPC miR444: 1e-49		UniProt no hits

RFAM MIR444: 2e-45

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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