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ABOUT THIS RECORD
ID:
MNEST045579
species:
Cichorium intybus
source:
microPC, original name:
miR164
Taxonomy by NCBI:
Cichorium intybus
Cichorium
Cichoriinae
Cichorieae
Cichorioideae
Asteraceae
Asterales
campanulids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGGAGAAGCAGGGCACGTG
miRNA*
TGTGCCCATCTTCCCCA
mismatches:
4
bulges:
0
View larger
pre-miRNA
TGGAGAAGCAGGGCACGTG
TATTACTAACTCATCATTGCACCATCATGAAAATGTCTGGACGACATCATGAAGCCAACAAGGTACCTGGTGAGGTCACTG
GTTCGAGGTTTCGGGACCTGGGTTCAGTGAGTAATCTCGAGCCAAAAGCTCATGGTTCTTGAAATGAGTTAGTGTTCCA
TGTGCCCATCTTCCCCA
dot-bracket secondary structure
.((.((((..(((((((((
...(((((((((((..........((((((...((((.....))))))))))......(((((.(((..(((((.(...((
((((((((((.(.((((....)))).....).))))))))))))..).)))))))))))))..)))))))))))...))
)))))))..)))).)).
SIMILARITIES
miRBase
ptc-MIR164e
:
0.000000003
PMRD
ptc-miRf11320-akr
:
0.000000003
microPC
miR164
:
0.000000003
UniProt
no hits
RFAM
MIR164: 0.00000005
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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