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ABOUT THIS RECORD

ID: MNEST045588
species: Triphysaria pusilla
source: microPC, original name: miR171

Taxonomy by NCBI:
Triphysaria pusilla Triphysaria Rhinantheae Orobanchaceae Lamiales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGATTGAGCCGTGCCAATAT

miRNA*
 GTTGGAACGGCTCAATCAAA

mismatches: 1
bulges: 0
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pre-miRNA
 ATGTTGGAACGGCTCAATCAAATCAAATCTCCCAAGAATTGGGTCCTTTAGTTTGATTGAGCCGTGCCAATAT

dot-bracket secondary structure
(((((((.(((((((((((((((.(((...((((.....))))...))).))))))))))))))).)))))))


SIMILARITIES
miRBase rco-MIR171e: 6e-20

PMRD vvi-miR171i: 1e-18

microPC miR171: 5e-36		UniProt no hits

RFAM MIR171_1: 1e-18

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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