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ABOUT THIS RECORD
ID:
MNEST045598
species:
Centaurea solstitialis
source:
microPC, original name:
miR159
Taxonomy by NCBI:
Centaurea solstitialis
Centaurea
Centaureinae
Cardueae
Carduoideae
Asteraceae
Asterales
campanulids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTTGGATTGAAGGGAGCTCT
miRNA*
AGCTCCTTGAAGTCCAATAG
mismatches:
3
bulges:
0
View larger
pre-miRNA
AG
AGCTCCTTGAAGTCCAATAG
AGGATCTGAGTGGGAAGATAGTGCTGCTGGCTTATGGATTCCTCAAGTCCTATCTTTATGGTTTTGTATAGGCTTTGT
GGCTTGCATAACCCAGGAGCTTTATTACCTTACTTTATGATCTTTT
TTTGGATTGAAGGGAGCTCT
dot-bracket secondary structure
((
((((((((..(((((((.((
((((((.(((((((..(((((.(((.((((.(((((.(..((.((((.((((((...........).))))).)))).
))..).))))).)))).))).)))))..)))))))...))))))))
.)))))))..))))))))))
SIMILARITIES
miRBase
vvi-MIR159c
:
0.00000000004
PMRD
vvi-miR159c
:
0.00000000004
microPC
miR159
:
1e-78
UniProt
no hits
RFAM
MIR159: 0.0000000006
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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