ABOUT THIS RECORDspecies: Oryza sativa
source: microPC, original name: miR819
Taxonomy by NCBI:
Oryza sativa Oryza Oryzeae Ehrhartoideae BEP clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCAGGTTATAAGACTTTCTAGC miRNA* TAGAAAGTCTTATAACCTGA mismatches: 0 bulges: 0 |
pre-miRNA
TCAGGTTATAAGACTTTCTAGCATTGCCCACATTCATATGCTAGAAAGTCTTATAACCTGA
dot-bracket secondary structure
((((((((((((((((((((((((((........)).))))))))))))))))))))))))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
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TCAGGTTATAAGACTTTCTAGCATTGCCCACATTCATATGCTAGAAAGTCTTATAACCTGA
dot-bracket secondary structure
((((((((((((((((((((((((((........)).))))))))))))))))))))))))
SIMILARITIES| miRBase osa-MIR819h: 7e-16 PMRD osa-miR819h: 7e-16 microPC miR819: 0.0000000000007 | UniProt no hits RFAM MIR1122: 0.000000000003 |
MOREmiRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
download this record
