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ABOUT THIS RECORD

ID: MNEST045607
species: Saccharum officinarum
source: microPC, original name: miR437

Taxonomy by NCBI:
Saccharum officinarum Saccharum officinarum complex Saccharum Andropogoneae Panicoideae PACCAD clade Poaceae Poales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 AAAGTTAGAGAAGTCTGACTT

miRNA*
 GTCATTTTTTTTATATCTTTGA

mismatches: 2
bulges: 3
View larger
pre-miRNA
 AAGTCATTTTTTTTATATCTTTGATCAAATTTATGGAAAAATGTATCAACATCTACAATATCAATTTTATTTTCATAAAATTCTCCATGAAATATTTCTT
AATAGTGCATTTATTCGAACTTGTAGATGTTAATATATTTTTCTAAAACTTTGGTCAAAGTTAGAGAAGTCTGACTT

dot-bracket secondary structure
((((((.((((((((...(((((((((((.((.(((((((((((((.(((((((((((....((((((((....))))))))....(((...((((....
))))...)))..........))))))))))).))))))))))))).)).))))))))))).))))))))..))))))


SIMILARITIES
miRBase ssp-MIR437c: 3e-89

PMRD sbi-miR437k: 7e-25

microPC miR437: 2e-25		UniProt no hits

RFAM no hits

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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