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ABOUT THIS RECORD
ID:
MNEST045612
species:
Nicotiana tabacum
source:
microPC, original name:
miR390
Taxonomy by NCBI:
Nicotiana tabacum
Nicotiana
Nicotianeae
Nicotianoideae
Solanaceae
Solanales
lamiids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CGCTATCCATCCTGAGTTTC
miRNA*
AGCTCAGGAGGGATAGCACC
mismatches:
3
bulges:
0
View larger
pre-miRNA
A
AGCTCAGGAGGGATAGCACC
ATGGAGAGACTATACTATCTTCATGAGCTTAAAACTGCGATCCGTTG
CGCTATCCATCCTGAGTTTC
dot-bracket secondary structure
(
(((((((((.(((((((..(
(((((((..........)))))))).((........)).........
.))))))).)))))))))).
SIMILARITIES
miRBase
mtr-MIR390
:
0.000004
PMRD
mtr-miR390
:
0.00002
microPC
miR390
:
3e-44
UniProt
no hits
RFAM
MIR390: 0.00002
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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