ABOUT THIS RECORDspecies: Hevea brasiliensis
source: microPC, original name: miR166
Taxonomy by NCBI:
Hevea brasiliensis Hevea Micrandreae Crotonoideae Euphorbiaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCGGACCAGGCTTCATTCCT miRNA* GAATGTTGTCTGGTTCAAGG mismatches: 3 bulges: 0 |
pre-miRNA
TGGGAATGTTGTCTGGTTCAAGGTCATGCGATGCTATACATATGATTTGTTTACCTTTTAGCTATTTCTCCTCGGACCAGGCTTCATTCCT
dot-bracket secondary structure
)(((((((..(((((((((.(((....(.(((((((.(((.......)))........)))).))).).))).)))))))))..)))))))
SIMILARITIES
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record
TGGGAATGTTGTCTGGTTCAAGGTCATGCGATGCTATACATATGATTTGTTTACCTTTTAGCTATTTCTCCTCGGACCAGGCTTCATTCCT
dot-bracket secondary structure
)(((((((..(((((((((.(((....(.(((((((.(((.......)))........)))).))).).))).)))))))))..)))))))
SIMILARITIES| miRBase rco-MIR166a: 1.0E-6 PMRD gma-miR166r: 1.0E-6 microPC miR166: 4.0E-46 | UniProt no hits RFAM 6mir-166: 2.0E-5 |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record
