ABOUT THIS RECORDspecies: Bruguiera gymnorhiza
source: microPC, original name: miR169
Taxonomy by NCBI:
Bruguiera gymnorhiza Bruguiera Rhizophoraceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA GAGCCAAGAATGGCTTGCCG miRNA* GTAAGCTGTTGCCCAGGCCAGCAGGCCTTTCTGGCTC mismatches: 2 bulges: 19 |
pre-miRNA
GAGCCAAGAATGGCTTGCCGTCGTCAATTTGCTTGCAAAAAGCAACATTTGCTCGGTAAGCTGTTGCCCAGGCCAGCAGGCCTTTCTGGCTC
dot-bracket secondary structure
((((((..((((((((((((..((.(((((((((.....)))))).))).)).))))))))))))....(((((....)))))...))))))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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GAGCCAAGAATGGCTTGCCGTCGTCAATTTGCTTGCAAAAAGCAACATTTGCTCGGTAAGCTGTTGCCCAGGCCAGCAGGCCTTTCTGGCTC
dot-bracket secondary structure
((((((..((((((((((((..((.(((((((((.....)))))).))).)).))))))))))))....(((((....)))))...))))))
SIMILARITIES| miRBase no hits PMRD no hits microPC no hits | UniProt no hits RFAM no hits |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record
