miRNEST 2.0, an integrative microRNA resource :: Browse
Home
Browse miRNAs
Deep-seq predictions
Mirtrons
miRNA genes
Degradomes
Download
Upload
Contact
Back to search results
ABOUT THIS RECORD
ID:
MNEST045642
species:
Brassica napus
source:
microPC, original name:
miR399
Taxonomy by NCBI:
Brassica napus
Brassica
Brassicaceae
Brassicales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGCCAAAGGAGATTTGCCC
miRNA*
GCAAGATCTCTATTGGCAGA
mismatches:
1
bulges:
1
View larger
pre-miRNA
GG
GCAAGATCTCTATTGGCAGA
AAACCATTACTTAGATCTTTGCATCTCTTTCTGCATTGATTTGTAGTGAGTTCTC
TGCCAAAGGAGATTTGCCC
dot-bracket secondary structure
((
(((.(((((((.((((((((
.(((((((((..(((((..((((........))))..))))))))))).))).))
)))))).))))))))))))
SIMILARITIES
miRBase
bna-MIR399
:
1e-49
PMRD
bna-miR399
:
1e-49
microPC
miR399
:
1e-49
UniProt
no hits
RFAM
mir-399: 2e-27
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
download this record