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ABOUT THIS RECORD
ID:
MNEST045647
species:
Gossypium hirsutum
source:
microPC, original name:
miR390
Taxonomy by NCBI:
Gossypium hirsutum
Gossypium
Malvoideae
Malvaceae
Malvales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AGCTCAGGAGGGATAGCGCC
miRNA*
CGCTATCCATCCTGAGTT
mismatches:
2
bulges:
0
View larger
pre-miRNA
AGCTCAGGAGGGATAGCGCC
ATGGATGATCCATCTTTCAAGCTTTCATGCATGTATGTTATTTGATCCTCATATAG
CGCTATCCATCCTGAGTT
dot-bracket secondary structure
(((((((((.(((((((((.
(((((.((((...(...((.((......)).))...)......)))).)).))).)
)))))))).)))))))))
SIMILARITIES
miRBase
ghr-MIR390c
:
2e-48
PMRD
ghr-miR390c
:
2e-48
microPC
miR390
:
2e-48
UniProt
no hits
RFAM
MIR390: 0.000000005
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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