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ABOUT THIS RECORD

ID: MNEST045663
species: Brassica napus
miRNA family: MIR319
source: microPC, original name: miR319

Taxonomy by NCBI:
Brassica napus Brassica Brassicaceae Brassicales malvids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
CTTGGACTGAAGGGAGCTCC

miRNA*
AGCTTTCTTCGGTCCACTCA

mismatches: 4
bulges: 0

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pre-miRNA
GGAGCTTTCTTCGGTCCACTCATAGAATAATATGTGAGATTTAATTGACTCTCGACTCATTCATCCAAATACCAAATGAAAGAATATGTAGACATATGGT
AAATGAATGAATGATGCTAGAGACAAATTGAATCTTCACTTCTCTATGCTTGGACTGAAGGGAGCTCC


dot-bracket secondary structure
((((((..((((((((((..((((((.......(((((((((((((..((((.(..((((((((.((..(((((.(((..............))).))))
)..)).))))))))..).))))...))))))))).))))...))))))..))))))))))..))))))



SIMILARITIES
miRBase ath-MIR319b: 1e-72

PMRD ath-miR319b: 1e-72

microPC miR319: 2e-92
UniProt no hits

RFAM MIR159: 2e-71

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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