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ABOUT THIS RECORD
ID:
MNEST045677
species:
Oryza sativa
miRNA family:
MIR156
source:
microPC, original name:
miR156
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGACAGAAGAGAGTGAGCAC
miRNA*
GCTCACTCTCTATCTGTCA
mismatches:
1
bulges:
1
View larger
pre-miRNA
TGACAGAAGAGAGTGAGCAC
ACACGGTGCTTTCTTAGCATGCAAGAGCCATGCTGGGAGCTGTGCGT
GCTCACTCTCTATCTGTCA
dot-bracket secondary structure
.(((((((((((((((((((
.((((((....(((((((((((....).)))))))))))))))).))
))))))))))).)))))).
SIMILARITIES
miRBase
osa-MIR156b
:
1e-43
PMRD
osa-miRf10227-akr
:
1e-43
microPC
miR156
:
1e-43
UniProt
no hits
RFAM
mir-156: 2e-42
MORE
miRNEST target predictions
non-miRNEST targets
HuntMi prediction:
true miRNA
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deep sequencing data evidence