miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



ABOUT THIS RECORD

ID: MNEST045680
species: Raphanus raphanistrum subsp raphanistrum
source: microPC, original name: miR159







SEQUENCE & STRUCTURE
miRNA
TTTGGATTGAAGGGAGCTCT

miRNA*
GGCTCCTTATAGTTCAAACG

mismatches: 1
bulges: 0

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pre-miRNA
AGGGCTCCTTATAGTTCAAACGAGAGTTTAGCGGGGTAAAGAAAAGCTGCTAAGCTATGGATACCATAAGCCCTAATCCTTGTATTGAAAAAGGACTTGG
TAATATGGCTTGCATATCTCAGGAGCTTTAACTTACCCTTTAATTGCTTTTACTCTTCTTTGGATTGAAGGGAGCTCT


dot-bracket secondary structure
((((((((((.(((((((((.((((((..((((((((((...((((((.((.((.((((.(..(((((...((...(((((.........)))))...))
...)))))..).)))).)).)).))))))...)))))))......)))...)))))).))))))))).))))))))))



SIMILARITIES
miRBase bra-MIR159a: 2e-74

PMRD bra-miR159a: 2e-74

microPC miR159: 3e-98
UniProt no hits

RFAM MIR159: 8e-59

Identical with: miR319 from microPC (MNEST046710)

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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