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ABOUT THIS RECORD
ID:
MNEST045684
species:
Gossypium hirsutum
source:
microPC, original name:
miR399
Taxonomy by NCBI:
Gossypium hirsutum
Gossypium
Malvoideae
Malvaceae
Malvales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGCCAAAGGAGATTTGCC
miRNA*
CAACTCTCCTTAAGCAAA
mismatches:
3
bulges:
0
View larger
pre-miRNA
GG
CAACTCTCCTTAAGCAAA
AATGGATGTGCTTTTCTTTGCATAATTCGATTT
TGCCAAAGGAGATTTGCC
dot-bracket secondary structure
((
(((.(((((((..(((((
(.(((((((((........)))).))))).)))
)))..))))))).)))))
SIMILARITIES
miRBase
ghr-MIR399d
:
7e-35
PMRD
ghr-miR399b
:
7e-35
microPC
miR399
:
7e-35
UniProt
no hits
RFAM
mir-399: 0.00000006
Identical with:
ghr-MIR399d
from miRBase (
MNEST041063
)
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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