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ABOUT THIS RECORD
ID:
MNEST045700
species:
Cucumis melo subsp. melo
miRNA family:
MIR168
source:
microPC, original name:
miR168
Taxonomy by NCBI:
Cucumis melo subsp. melo
Cucumis melo
Cucumis
Cucurbitaceae
Cucurbitales
fabids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TCGCTTGGTGCAGGTCGGGAA
miRNA*
CCCGCCTTGCATCAACTGA
mismatches:
3
bulges:
0
View larger
pre-miRNA
TCGCTTGGTGCAGGTCGGGAA
CTGTTTCGCTTTTTGTTCACGTTGATCTTGATTGTTGTTGTTTCTTTCAATTTCCTCTGCGTTGTTCAGGGGAAATATA
TATGTGTGTGTGTGTGTGTAATCGAGCGAATTGGAT
CCCGCCTTGCATCAACTGA
dot-bracket secondary structure
(((.((((((((((.(((((.
((..(((((((.(((..(((.............................((((((((((.......))))))))))(((
(((....)))))))))..)))..)))))))..)).)
)))).)))))))))).)))
SIMILARITIES
miRBase
ptc-MIR168a
:
0.0000000001
PMRD
pts-miR168b
:
0.0000000001
microPC
miR168
:
4e-54
UniProt
no hits
RFAM
MIR168: 0.000000002
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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