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ABOUT THIS RECORD
ID:
MNEST045719
species:
Oryza sativa
source:
microPC, original name:
miR390
Taxonomy by NCBI:
Oryza sativa
Oryza
Oryzeae
Ehrhartoideae
BEP clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AAGCTCAGGAGGGATAGC
miRNA*
TATCTATCCTGAGCT
mismatches:
2
bulges:
0
View larger
pre-miRNA
AAGCTCAGGAGGGATAGC
GCCTCGAAATCAAACTAGGCGC
TATCTATCCTGAGCT
dot-bracket secondary structure
.(((((((((.(((((((
((((.(........).))))))
))))).)))))))))
SIMILARITIES
miRBase
osa-MIR390
:
2e-25
PMRD
osa-miR390
:
2e-25
microPC
miR390
:
2e-25
UniProt
no hits
RFAM
MIR390: 3e-24
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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