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ABOUT THIS RECORD
ID:
MNEST045724
species:
Panicum virgatum
source:
microPC, original name:
miR399
Taxonomy by NCBI:
Panicum virgatum
Panicum
Paniceae
Panicoideae
PACCAD clade
Poaceae
Poales
commelinids
Liliopsida
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGCCAAAGGAGATTTGCCC
miRNA*
GCAACACTCCGTTGGCAGG
mismatches:
3
bulges:
0
View larger
pre-miRNA
GG
GCAACACTCCGTTGGCAGG
TGCTACGCAAACCGGCCCTGCCGCCGGTCACC
TGCCAAAGGAGATTTGCCC
dot-bracket secondary structure
((
((((..((((.((((((((
((........((((((......))))))))))
)))))).))))..))))))
SIMILARITIES
miRBase
mtr-MIR399g
:
0.00001
PMRD
vvi-miR399g
:
0.0002
microPC
miR399
:
3e-34
UniProt
no hits
RFAM
mir-399: 0.0002
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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