ABOUT THIS RECORDspecies: Glycine max
source: microPC, original name: miR167
Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGAAGCTGCCAGCATGATCT miRNA* ATCATGTGGCTGCTTCA mismatches: 2 bulges: 1 |
pre-miRNA
TGAAGCTGCCAGCATGATCTGAGTTTACCTTCTATTGGTAAGAACAGATCATGTGGCTGCTTCA
dot-bracket secondary structure
.(((((.((((.(((((((((..((((((.......))))))..))))))))))))).))))).
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
degradome data
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deep sequencing data evidence
TGAAGCTGCCAGCATGATCTGAGTTTACCTTCTATTGGTAAGAACAGATCATGTGGCTGCTTCA
dot-bracket secondary structure
.(((((.((((.(((((((((..((((((.......))))))..))))))))))))).))))).
SIMILARITIES| miRBase gso-MIR167a: 9e-31 PMRD gma-miR167n: 9e-31 microPC miR167: 9e-31 | UniProt no hits RFAM MIR167_1: 0.00005 |
Identical with: gso-MIR167a from miRBase (MNEST040632) |
MOREmiRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
degradome data
download this record
deep sequencing data evidence
