ABOUT THIS RECORDspecies: Vigna unguiculata
source: microPC, original name: miR169
Taxonomy by NCBI:
Vigna unguiculata Vigna Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CCAAGGATGACTTGCCGG miRNA* GGCAAGTTGTTCTTGG mismatches: 2 bulges: 0 |
pre-miRNA
CCAAGGATGACTTGCCGGCAGTTATGTGTTTACTCTCTCTTCGTCGTCGTTTTTTTCGTCGGCCGGCAAGTTGTTCTTGG
dot-bracket secondary structure
(((((((..((((((((((......((....))...........((.((.......)).))))))))))))..)))))))
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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CCAAGGATGACTTGCCGGCAGTTATGTGTTTACTCTCTCTTCGTCGTCGTTTTTTTCGTCGGCCGGCAAGTTGTTCTTGG
dot-bracket secondary structure
(((((((..((((((((((......((....))...........((.((.......)).))))))))))))..)))))))
SIMILARITIES| miRBase vvi-MIR169p: 0.00006 PMRD vvi-miR169p: 0.00006 microPC miR169: 0.0002 | UniProt no hits RFAM MIR169_2: 0.00007 |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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