ABOUT THIS RECORDspecies: Hevea brasiliensis
miRNA family: MIR166
source: microPC, original name: miR166
Taxonomy by NCBI:
Hevea brasiliensis Hevea Micrandreae Crotonoideae Euphorbiaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TCGGACCAGGCTTCATTCCTC miRNA* GGAATGTTGTCTGGTTCAAGG mismatches: 3 bulges: 0 |
pre-miRNA
GGGGAATGTTGTCTGGTTCAAGGTCATGCGATGCTATACATATGATTTGTTTACCTTTTAGCTATTTCTCCTCGGACCAGGCTTCATTCCTC
dot-bracket secondary structure
((((((((..(((((((((.(((....(.(((((((.(((.......)))........)))).))).).))).)))))))))..))))))))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record
GGGGAATGTTGTCTGGTTCAAGGTCATGCGATGCTATACATATGATTTGTTTACCTTTTAGCTATTTCTCCTCGGACCAGGCTTCATTCCTC
dot-bracket secondary structure
((((((((..(((((((((.(((....(.(((((((.(((.......)))........)))).))).).))).)))))))))..))))))))
SIMILARITIES| miRBase rco-MIR166a: 0.000001 PMRD gma-miR166r: 0.000001 microPC miR166: 5e-46 | UniProt no hits RFAM mir-166: 0.00002 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record
