miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST045800
species: Hevea brasiliensis
miRNA family: MIR166
source: microPC, original name: miR166

Taxonomy by NCBI:
Hevea brasiliensis Hevea Micrandreae Crotonoideae Euphorbiaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
TCGGACCAGGCTTCATTCCTC

miRNA*
GGAATGTTGTCTGGTTCAAGG

mismatches: 3
bulges: 0

View larger
pre-miRNA
GGGGAATGTTGTCTGGTTCAAGGTCATGCGATGCTATACATATGATTTGTTTACCTTTTAGCTATTTCTCCTCGGACCAGGCTTCATTCCTC

dot-bracket secondary structure
((((((((..(((((((((.(((....(.(((((((.(((.......)))........)))).))).).))).)))))))))..))))))))


SIMILARITIES
miRBase rco-MIR166a: 0.000001

PMRD gma-miR166r: 0.000001

microPC miR166: 5e-46
UniProt no hits

RFAM mir-166: 0.00002

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record





Liczniki na strone;