ABOUT THIS RECORDspecies: Euphorbia esula
source: microPC, original name: miR171
Taxonomy by NCBI:
Euphorbia esula Euphorbia Euphorbieae Euphorbioideae Euphorbiaceae Malpighiales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TTGAGCCGTGCCAATATCAC miRNA* GATATTGGTGCGGTTCAATC mismatches: 4 bulges: 0 |
pre-miRNA
GAGATATTGGTGCGGTTCAATCGGAGAACTTTGCTCTTTGTTTAGAGAGCTATGTTGTTTGATTGAGCCGTGCCAATATCAC
dot-bracket secondary structure
..((((((((..(((((((((((((.(((...((((((......))))))...))).)))))))))))))..))))))))..
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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GAGATATTGGTGCGGTTCAATCGGAGAACTTTGCTCTTTGTTTAGAGAGCTATGTTGTTTGATTGAGCCGTGCCAATATCAC
dot-bracket secondary structure
..((((((((..(((((((((((((.(((...((((((......))))))...))).)))))))))))))..))))))))..
SIMILARITIES| miRBase rco-MIR171b: 0.000000000000004 PMRD vvi-miR171d: 0.0000000003 microPC miR171: 2e-41 | UniProt no hits RFAM MIR171_1: 0.00000000000008 |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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