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ABOUT THIS RECORD
ID:
MNEST045808
species:
Raphanus raphanistrum subsp raphanistrum
source:
microPC, original name:
miR319
SEQUENCE & STRUCTURE
miRNA
TTTGGATTGAAGGGAGCTC
miRNA*
GCTCCTTATAGTTCAAACG
mismatches:
1
bulges:
0
View larger
pre-miRNA
GG
GCTCCTTATAGTTCAAACG
AGAGTTTAGCGGGGTAAAGAAAAGCTGCTAAGCTATGGATACCATAAGCCCTAATCCTTGTATTGAAAAAGGACTTGGT
AATATGGCTTGCATATCTCAGGAGCTTTAACTTACCCTTTAATTGCTTTTACTCTTC
TTTGGATTGAAGGGAGCTC
dot-bracket secondary structure
((
(((((((.(((((((((.(
(((((..((((((((((...((((((.((.((.((((.(..(((((...((...(((((.........)))))...)).
..)))))..).)))).)).)).))))))...)))))))......)))...)))))).
))))))))).)))))))))
SIMILARITIES
miRBase
bra-MIR159a
:
3e-73
PMRD
bra-miR159a
:
3e-73
microPC
miR159
:
4e-97
UniProt
no hits
RFAM
MIR159: 3e-58
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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