ABOUT THIS RECORDspecies: Vigna unguiculata
miRNA family: MIR319
source: microPC, original name: miR319
Taxonomy by NCBI:
Vigna unguiculata Vigna Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA CTTGGACTGAAGGGAGCTCC miRNA* AGCTTTCTTCAGTCCACTCA mismatches: 5 bulges: 0 |
pre-miRNA
GAGCTTTCTTCAGTCCACTCATAGGTGGCAGTAAGATTCAATTAGCTGCCGACTCATTCATCCAAATGCTGAGTAGTGATACTCTTAAAGATACTCATCA
AATGAGTGAATGATGCGGGAGACAAATTGATTCTTAAGTTTCCTGTACTTGGACTGAAGGGAGCTCC
dot-bracket secondary structure
(((((..((((((((((...(((((..((..(((((.((((((.(((.(((..(((((((..((..((.((((((.(((.....)))....)))))).))
..))..)))))))..))).)).).)))))).))))).))..)))))...))))))))))..))))).
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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GAGCTTTCTTCAGTCCACTCATAGGTGGCAGTAAGATTCAATTAGCTGCCGACTCATTCATCCAAATGCTGAGTAGTGATACTCTTAAAGATACTCATCA
AATGAGTGAATGATGCGGGAGACAAATTGATTCTTAAGTTTCCTGTACTTGGACTGAAGGGAGCTCC
dot-bracket secondary structure
(((((..((((((((((...(((((..((..(((((.((((((.(((.(((..(((((((..((..((.((((((.(((.....)))....)))))).))
..))..)))))))..))).)).).)))))).))))).))..)))))...))))))))))..))))).
SIMILARITIES| miRBase gma-MIR319a: 2e-53 PMRD gma-miR319a: 2e-53 microPC miR319: 1e-91 | UniProt no hits RFAM MIR159: 4e-39 |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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