miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse



ABOUT THIS RECORD

ID: MNEST045832
species: Curcuma longa
source: microPC, original name: miR167

Taxonomy by NCBI:
Curcuma longa Curcuma Zingiberaceae Zingiberales commelinids Liliopsida Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 AAGCTGCCAGCATGATCT

miRNA*
 ATCATTATGGCAGTTT

mismatches: 2
bulges: 0
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pre-miRNA
 AAGCTGCCAGCATGATCTCATGATATCCTTCTTTTCTTTTTCTTCTCAATCTCTCCTTTTGAATTTGTTTTCCGAAAAAAATAGATTAAAAATTCTGTAT
ATGTAACTAGGTCTAAATGTGAAGGAATCGACGAGATCATTATGGCAGTTT

dot-bracket secondary structure
(((((((((..((((((((.((((.((((((.....((((((....(((..((.......))..)))......)))))).(((((........)))))..
....................))))))))))..))))))))..)))))))))


SIMILARITIES
miRBase osa-MIR167h: 0.0005

PMRD vvi-miR167c: 0.0005

microPC miR167: 7e-34		UniProt no hits

RFAM no hits

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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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