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ABOUT THIS RECORD
ID:
MNEST045840
species:
Gossypium raimondii
source:
microPC, original name:
miR156
Taxonomy by NCBI:
Gossypium raimondii
Gossypium
Malvoideae
Malvaceae
Malvales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
CAGAAGATAGAGAGCACA
miRNA*
TGCTCTTTATGCTTCTG
mismatches:
0
bulges:
1
View larger
pre-miRNA
CAGAAGATAGAGAGCACA
GATGATGGTGTGCAATTAGGAGTCTTGAAGCAATGCATCCCACTCCTTTG
TGCTCTTTATGCTTCTG
dot-bracket secondary structure
((((((((((((((((((
((.(((((..((((.(((((...))))).....))))..))).)).))))
)))))))))).))))))
SIMILARITIES
miRBase
gra-MIR157a
:
4e-43
PMRD
gra-miR157a
:
4e-43
microPC
miR157
:
4e-43
UniProt
no hits
RFAM
no hits
Identical with:
miR157
from microPC (
MNEST044919
)
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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