miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: Browse

ABOUT THIS RECORD

ID: MNEST045851
species: Amborella trichopoda
source: microPC, original name: miR396

Taxonomy by NCBI:
Amborella trichopoda Amborella Amborellaceae Amborellales basal Magnoliophyta Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms

SEQUENCE & STRUCTURE

miRNA
TCCACAGGCTTTCTTGAAC

miRNA*
TCAAGAAATCTGTGGA

mismatches: 0
bulges: 1

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pre-miRNA
TCCACAGGCTTTCTTGAACATGGTATTCCGACGGGCCCTCTTCGAGTTAGCTATCAGAGATGCAATGTTGAGTAACAGGTTCAAGAAATCTGTGGA

dot-bracket secondary structure
((((((((.((((((((((.((.(((((.((((.((.((((...((....))...))))..))..))))))))).)).))))))))))))))))))

SIMILARITIES

miRBase no hits

PMRD no hits

microPC no hits

UniProt no hits

RFAM no hits

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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