ABOUT THIS RECORDspecies: Glycine max
miRNA family: MIR156
source: microPC, original name: miR156
Taxonomy by NCBI:
Glycine max Glycine Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGACAGAAGAGAGTGAGCAC miRNA* GCTCACTTCTCTATCTGTCA mismatches: 1 bulges: 2 |
pre-miRNA
TGACAGAAGAGAGTGAGCACATGCTAGTGGTATTTGTATGAGGGCATACAATTGCGGGTGCGTGCTCACTTCTCTATCTGTCA
dot-bracket secondary structure
.(((((((((((((((((((..(((....(((.(((((((....))))))).))).)))..)))))))).))))).)))))).
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
degradome data
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deep sequencing data evidence
TGACAGAAGAGAGTGAGCACATGCTAGTGGTATTTGTATGAGGGCATACAATTGCGGGTGCGTGCTCACTTCTCTATCTGTCA
dot-bracket secondary structure
.(((((((((((((((((((..(((....(((.(((((((....))))))).))).)))..)))))))).))))).)))))).
SIMILARITIES| miRBase gma-MIR156a: 6e-42 PMRD gma-miR156a: 6e-42 microPC miR156: 6e-42 | UniProt no hits RFAM mir-156: 0.0000000000003 |
MOREmiRNEST target predictions
non-miRNEST targets
HuntMi prediction: true miRNA
degradome data
download this record
deep sequencing data evidence
