miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse

Back to search results



ABOUT THIS RECORD

ID: MNEST045867
species: Carthamus tinctorius
miRNA family: MIR156
source: microPC, original name: miR156

Taxonomy by NCBI:
Carthamus tinctorius Carthamus Centaureinae Cardueae Carduoideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TGACAGAAGAGAGTGAGCAC

miRNA*
 GCTCACTGCTCTATCTGTCA

mismatches: 1
bulges: 2
View larger
pre-miRNA
 TGACAGAAGAGAGTGAGCACACAAAGGCAAATTATACCCAAGAGTCTTGTATGATTGTTTTGGGTGCTCACTGCTCTATCTGTCA

dot-bracket secondary structure
.(((((((((((((((((((...(((((((.((((((...........)))))))))))))..))))))))).)))).)))))).


SIMILARITIES
miRBase ath-MIR156a: 0.0000000003

PMRD ath-miR156a: 0.0000000003

microPC miR156: 4e-43		UniProt no hits

RFAM mir-156: 0.000000005

MORE

miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record




Liczniki na strone;