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ABOUT THIS RECORD

ID: MNEST045879
species: Cichorium intybus
miRNA family: MIR166
source: microPC, original name: miR166

Taxonomy by NCBI:
Cichorium intybus Cichorium Cichoriinae Cichorieae Cichorioideae Asteraceae Asterales campanulids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 TCGGACCAGGCTTCATTCC

miRNA*
 GATGTTGTCTGGCTCCAGGCC

mismatches: 2
bulges: 2
View larger
pre-miRNA
 GGGATGTTGTCTGGCTCCAGGCCACTAGAGAACCTTATGGATCTCTCGATCTATGGATCTCTTTTCTCTCTATATATATTACATAATATATATGTATATC
ATCATAGTCAACGCATCTGATTTCATTGCCTTCGTTGACTAGAGATGGTGATAGATCATTCTTGATCTGGTGTCGTCGGACCAGGCTTCATTCC

dot-bracket secondary structure
((((((..((((((.(((.(((.((.(((((.((..(((((((....))))))))).)))))........((((((((((....))))))))))..((((
(((.(((((((((((..((....)).)))....))))))))..))))))).(((((((....)))))))..)).))))))))))))..))))))


SIMILARITIES
miRBase vvi-MIR166e: 0.00000004

PMRD vvi-miR166e: 0.00000004

microPC miR166: 1e-48		UniProt no hits

RFAM mir-166: 0.0000007

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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