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ABOUT THIS RECORD
ID:
MNEST045883
species:
Cichorium intybus
source:
microPC, original name:
miR169
Taxonomy by NCBI:
Cichorium intybus
Cichorium
Cichoriinae
Cichorieae
Cichorioideae
Asteraceae
Asterales
campanulids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
AGCCAAGGATGACTTGCC
miRNA*
CAGTCTCCTTAGCT
mismatches:
1
bulges:
2
View larger
pre-miRNA
AGCCAAGGATGACTTGCC
TGTTTCTTCTTTACCAAGGGTACTTGGTGTTCTTAAAGACCTTGTTTGGTTGGTTATCAGG
CAGTCTCCTTAGCT
dot-bracket secondary structure
(((.(((((.((((.(((
((.........(((((((....)))))))....(((.((((......))))..))).))))
)))))))))).)))
SIMILARITIES
miRBase
ath-MIR169m
:
0.00000007
PMRD
ath-miR169m
:
0.00000007
microPC
miR169
:
7e-48
UniProt
no hits
RFAM
MIR169_5: 0.000001
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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