ABOUT THIS RECORDspecies: Phaseolus vulgaris
source: microPC, original name: miR167
Taxonomy by NCBI:
Phaseolus vulgaris Phaseolus Phaseoleae Papilionoideae Fabaceae Fabales fabids rosids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms
SEQUENCE & STRUCTURE| miRNA TGAAGCTGCCAGCATGATCT miRNA* GTCATGCTGTGACAGCCTCA mismatches: 2 bulges: 2 |
pre-miRNA
TGAAGCTGCCAGCATGATCTAGCTTTGGTTAGAGAGAGCAGAAGAGTGCTAACCCTGACTAGGTCATGCTGTGACAGCCTCA
dot-bracket secondary structure
.((.(((((((((((((((((((...((((((.....((......)).))))))..).))))))))))))).).)))).)).
SIMILARITIES
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miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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TGAAGCTGCCAGCATGATCTAGCTTTGGTTAGAGAGAGCAGAAGAGTGCTAACCCTGACTAGGTCATGCTGTGACAGCCTCA
dot-bracket secondary structure
.((.(((((((((((((((((((...((((((.....((......)).))))))..).))))))))))))).).)))).)).
SIMILARITIES| miRBase gma-MIR167a: 1e-27 PMRD gma-miR167a: 1e-27 microPC miR167: 2e-41 | UniProt no hits RFAM MIR167_1: 0.0000000000003 |
MOREmiRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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