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ABOUT THIS RECORD

ID: MNEST045926
species: Ipomoea nil
miRNA family: MIR319
source: microPC, original name: miR319

Taxonomy by NCBI:
Ipomoea nil Ipomoea Ipomoeeae Convolvulaceae Solanales lamiids asterids core eudicotyledons eudicotyledons Magnoliophyta Spermatophyta Euphyllophyta Tracheophyta Embryophyta Streptophytina Streptophyta Viridiplantae Eukaryota cellular organisms






SEQUENCE & STRUCTURE
miRNA
 CTTGGACTGAAGGGAGCTCC

miRNA*
 AGCTTTCTTCAGTCCAAACA

mismatches: 4
bulges: 0
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pre-miRNA
 GAGCTTTCTTCAGTCCAAACATGGGTGGCAGTAGGATTCAATTAGCTTCCGACTCATTCATCCAAATGCTGAGATGAGATGACGATGAACCCGGCCTTGA
TGACTAATGAACACTGTCTCAGTAACTGAGTGAATGATGCGGGAGACAAGTTGGATCTTAAGCTTCCTGTACTTGGACTGAAGGGAGCTCC

dot-bracket secondary structure
(((((..(((((((((((..(((((.(((..((((((((((((.(((((((..(((((((..((..(((((((((.((....((.......))...((.(
(.....)).))..)))))))))))..))..)))))))..)))))).).)))))))))))).))).)))))..)))))))))))..))))).


SIMILARITIES
miRBase rco-MIR319a: 8e-28

PMRD ptc-miR319a: 2e-25

microPC miR319: 5e-106		UniProt no hits

RFAM MIR159: 1e-26

MORE

miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction: true miRNA
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