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ABOUT THIS RECORD
ID:
MNEST045936
species:
Gossypium raimondii
miRNA family:
MIR157
source:
microPC, original name:
miR157
Taxonomy by NCBI:
Gossypium raimondii
Gossypium
Malvoideae
Malvaceae
Malvales
malvids
rosids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TGACAGAAGATAGAGAGCAC
miRNA*
GCTCTTTATGCTTCTGTCA
mismatches:
1
bulges:
1
View larger
pre-miRNA
TGACAGAAGATAGAGAGCAC
AGATGATGGTGTGCAATTAGGAGTCTTGAAGCAATGCATCCCACTCCTTTGT
GCTCTTTATGCTTCTGTCA
dot-bracket secondary structure
.(((((((((((((((((((
(((.(((((..((((.(((((...))))).....))))..))).)).)))))
))))))))).)))))))).
SIMILARITIES
miRBase
gra-MIR157a
:
1e-46
PMRD
gra-miR157a
:
1e-46
microPC
miR157
:
1e-46
UniProt
no hits
RFAM
no hits
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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