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ABOUT THIS RECORD
ID:
MNEST045947
species:
Helianthus tuberosus
source:
microPC, original name:
miR159
Taxonomy by NCBI:
Helianthus tuberosus
Helianthus
Heliantheae
Heliantheae alliance
Asteroideae
Asteraceae
Asterales
campanulids
asterids
core eudicotyledons
eudicotyledons
Magnoliophyta
Spermatophyta
Euphyllophyta
Tracheophyta
Embryophyta
Streptophytina
Streptophyta
Viridiplantae
Eukaryota
cellular organisms
SEQUENCE & STRUCTURE
miRNA
TTGGATTGAAGGGAGCTCT
miRNA*
AGCTCCTTAAAGTCCAATA
mismatches:
2
bulges:
0
View larger
pre-miRNA
AG
AGCTCCTTAAAGTCCAATA
GAAGATCTGAGTGAGAACATAGAGCTGCTAGTTTATGGATCCCTCAAGTCCTATCTTTGTTGATGTATAGGCTTTGTGG
CTTGCATACACTTGGAGCTTTATTACCCTCCTTATGATCCTTTT
TTGGATTGAAGGGAGCTCT
dot-bracket secondary structure
((
((((((((..(((((((.(
((.((((((((.(((...((((((((.(.(((.((((.(..((.((((.((((((.........).))))).)))).))
..).)))).))).).))))))))....))))))).)))).))).
)))))))..))))))))))
SIMILARITIES
miRBase
sly-MIR159
:
0.0000005
PMRD
sly-miR159
:
0.0000005
microPC
miR159
:
2e-89
UniProt
no hits
RFAM
MIR159: 0.00001
MORE
miRNEST target predictions
non-miRNEST targets: none
HuntMi prediction:
true miRNA
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