ABOUT THIS RECORDspecies: Raphanus raphanistrum subsp raphanistrum
miRNA family: MIR168
source: microPC, original name: miR168
SEQUENCE & STRUCTURE| miRNA TCGCTTGGTGCAGGTCGGGAC miRNA* TCCCGCCTTGCATCAACTGA mismatches: 2 bulges: 1 |
pre-miRNA
ATCGCTTGGTGCAGGTCGGGACTAATTCGCTGACACAGCCACGTGGCTCTTTTTCTTATTGGTTTGTGAGCAGGGATTGGATCCCGCCTTGCATCAACTGA
dot-bracket secondary structure
)(((.((((((((((.((((((((((((.(((.((((((((...((........))...))).)))))..)))))))))).))))).)))))))))).)))
SIMILARITIES
MORE
miRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
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ATCGCTTGGTGCAGGTCGGGACTAATTCGCTGACACAGCCACGTGGCTCTTTTTCTTATTGGTTTGTGAGCAGGGATTGGATCCCGCCTTGCATCAACTGA
dot-bracket secondary structure
)(((.((((((((((.((((((((((((.(((.((((((((...((........))...))).)))))..)))))))))).))))).)))))))))).)))
SIMILARITIES| miRBase ath-MIR168a: 1.0E-21 PMRD ath-miRf10239-akr: 1.0E-21 microPC miR168: 5.0E-52 | UniProt no hits RFAM 8MIR168: 3.0E-32 |
MOREmiRNEST target predictions: none
non-miRNEST targets: none
HuntMi prediction: true miRNA
download this record
